In this tutorial similarity/distance based trees and phylogenetic trees (maximum likelihood and maximum parsimony trees) are calculated for a set of aligned sequences. Different groups are defined in the Comparison window giving a nice overview of the relationships, the clusters present in the database and the outliers.
PDF file:
Download sample data:
FASTA 16S sequences
This FASTA file contains DNA sequences of the 16S rRNA gene for a set of 14 strains.
See tutorial video: